Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015838824.1_cds_XP_016507087.1_20247
CDS Infomation

[gene=LOC107824795] [db_xref=GeneID:107824795] [protein=ubiquitin domain-containing protein DSK2b-like isoform X2] [protein_id=XP_016507087.1] [location=complement(join(9910..10058,10156..10239,10772..10800,11022..11080,11691..11804,11935..12149,12984..13745,19305..19539))] [gbkey=CDS]
Sequence

ATGAGTATGGTCGGCGGCGATTCAAACAAGGAGAATAGCACCGGCGCCGGCGAAGGCGTT
ACAATCAACGTCCGATGTTCCAGCGGCTCGAAATTCTCCGTGAAAGTTAACCTCGATTCC
ACCGTAGGATCCTTCAAGTCTATTCTTGTACAGCACGCAAACATTCCTGCTGAAAATCAG
AGATTGATCTATAAAGGCCGCATCTTAAAAGACGAGCAAACTCTCGAAAGTTACGGTCTG
GAGGCGGATCACACTGTGCATTTAGTTCGAGGTTCCGGCCCAGCTCCCTCTGCAAACCCT
GCAAGTTCAACCAATGCTGGAGGTCCAAATACAGATCAGCATGCACCAAGAGATGCTGCT
TCTAATGTAGACGGGCCATTTCCGGGATCAGGCCTTGGAGCTTCACTGTTTCCTGGTCTT
GGAAGTGGTGGTGGTGGTGGTGGTTTGTTTGGAGCTGGACTTCCAGATTTTGAGCAGGTC
CAGCAGCAGTTGACTCAAAACCCCAACATGATGAGAGATATGTTGAATATGCCTCTTGTC
CAGAATTTAATGAATAACCCTGAAACCATTCGCAACTTGATCATGAATAATCCCCAAATG
CGAGAGATCATGGAGCGTAATCCCGAGCTTTCTCACGTACTCAATGATCCTGTGACTCTT
CGACAGACAATGGAGGCTGCACGAAACCCTGAACTTATGCGTGAGATGATGCGCAATACT
GACAGGGCCATGAGCAATATTGAATCTTCTCCTGAGGGATTTAACATGCTGAGGCGTATG
TATGAAAATGTCCAAGAGCCACTCCTAAATGCAACAACATTGTCTGGAGATACGAGAAAT
GATGTGGGGTCTAACCCGTTTGCAGCTCTTTTGGGAGCACAAGGTGGTGGGCAAGGCAGA
CATCAGTCAAATAATCCTCCAACTTCCGGTTCTGAGACAACTGATAATCCGCCTGCTCCT
AATACTAATCCACTTCCTAATCCTTGGGCATCTGCAGCTGGAGCTGCCCAAGCCAATACC
ACTGCTAGGTCAAATACTGCTGCCGATACTAGGGCTGCACCACTTGGTGGCTTAGGTGGA
CTTGCTTCCCCAGGTTTGGAGCAAATGCTAAGTGGCATGCCAGATACCACTTCTCTAAAT
CAAATGATGCAGAACCCTGAGATCTCACAGATGATGCAATCTCTCCTCTCAAATCCTCAG
TACATGAACCAGGTTTTAGGGCTGAACCCACAGCTAAGAGGCATGCTCGATTCCAACTCC
CATCTTAGAGAAATGATGCAAAATCCTGAGTTTATTCGCCAATTGACATCACCTGAGACT
ATGCAGCAACTTATGACTTTTCAGCATGGGCTTTTGTCTCAAGCTTGGCGGCAGCAAACA
AACCAACAACTGGGCCAAAATGCTGGTGGAGCAGCAGTTGACAATGGAATGGAAATGCTG
ATGAACATGTTTGGTGGACTTGAGGCAGGGGTCTTGGGTGTCCCTAACAGATCTAATGTG
CCCCCAGAGGAACTATACGCTACTCAGCTAACCCAGTTACAAGAAATGGGTTTCTTTGAC
ACTCAAGAAAATATCCGGGCACTGATTGCCACTGCAGGCAATGTTCATGCTGCAGTAGAG
CGACTTATTGGAAATTCTGGACAGTAG

Peptide Sequence

PEP ID

XP_016507087.1
PEP Infomation

PREDICTED: ubiquitin domain-containing protein DSK2b-like isoform X2 [Nicotiana tabacum]
Sequence

MSMVGGDSNKENSTGAGEGVTINVRCSSGSKFSVKVNLDSTVGSFKSILVQHANIPAENQ
RLIYKGRILKDEQTLESYGLEADHTVHLVRGSGPAPSANPASSTNAGGPNTDQHAPRDAA
SNVDGPFPGSGLGASLFPGLGSGGGGGGLFGAGLPDFEQVQQQLTQNPNMMRDMLNMPLV
QNLMNNPETIRNLIMNNPQMREIMERNPELSHVLNDPVTLRQTMEAARNPELMREMMRNT
DRAMSNIESSPEGFNMLRRMYENVQEPLLNATTLSGDTRNDVGSNPFAALLGAQGGGQGR
HQSNNPPTSGSETTDNPPAPNTNPLPNPWASAAGAAQANTTARSNTAADTRAAPLGGLGG
LASPGLEQMLSGMPDTTSLNQMMQNPEISQMMQSLLSNPQYMNQVLGLNPQLRGMLDSNS
HLREMMQNPEFIRQLTSPETMQQLMTFQHGLLSQAWRQQTNQQLGQNAGGAAVDNGMEML
MNMFGGLEAGVLGVPNRSNVPPEELYATQLTQLQEMGFFDTQENIRALIATAGNVHAAVE
RLIGNSGQ

Transcript Sequence

Gene sequence data has not been registered.